This study examines the phylogeny and genetic diversity of the genus Acanthodactylus in the easternmost part of its distribution range, particularly in Pakistan. Using a concatenated dataset of mitochondrial (16S, COI, cyt b) and nuclear (Rag1) genes, we reconstructed the phylogenetic relationships using two tree-building methods that consistently revealed four strongly supported major clades (A-D). These clades exhibit significant genetic differentiation, with pronounced uncorrected p distances among them. Clade A, consisting of a single sequence identified as A. micropholis, is sister to the remaining clades. Clades B and C, both identified as A. blanfordii from the Helmand Basin in northwestern Balochistan, are geographically separated by the Chagai Hills and show moderate genetic differentiation. Clade D, identified as A. cantoris, is the most divergent and widespread clade, yet it shows shallow intraspecific genetic variation. An additional analysis of 177 cyt b sequences, including previously published data, supported our four main clades from the concatenated dataset. Clades B and C are novel and have not been identified before. Our research enhances the understanding of the evolutionary relationships and geographic distribution of Acanthodactylus in the eastern part of their wide distribution range and provides a well-supported phylogenetic framework for further taxonomic studies and conservation measures. Furthermore, we identify the type locality (“Ramnuggar”) of A. cantoris with Rasool Nagar (formerly called Ramnagar; 32.33°N, 73.78°E), Wazirabad District, Punjab Province, Pakistan.
Purchase
Buy instant access (PDF download and unlimited online access):
Institutional Login
Log in with Open Athens, Shibboleth, or your institutional credentials
Personal login
Log in with your brill.com account
Agarwal, I., Bauer, A.M., Gamble, T., Giri, V.B., Jablonski, D., Khandekar, A., Mohapatra, P.P., Masroor, R., Mishra, A., Ramakrishnan, U. (2022): The evolutionary history of an accidental model organism, the leopard gecko Eublepharis macularius (Squamata: Eublepharidae). Mol. Phylogenet. Evol. 168: 107414.
Agarwal, I., Ramakrishnan, U. (2017): A phylogeny of open-habitat lizards (Squamata: Lacertidae: Ophisops) supports the antiquity of Indian grassy biomes. J. Biogeogr. 44: 2021-2032.
Anderson, S.C. (1999): The Lizards of Iran. Society for the Study of Amphibians and Reptiles, Oxford, OH.
Anonymous (2024): Ramnagar. https://www.euttaranchal.com/tourism/ramnagar.php [accessed 28 December 2024].
Arnold, E.N. (1983): Osteology, genitalia and the relationships of Acanthodactylus (Reptilia: Lacertidae). Bull. Brit. Mus. Nat. Hist. (Zool.) 44: 291-339.
Arnold, E.N., Arribas, O., Carranza, S. (2007): Systematics of the Palaearctic and Oriental lizard tribe Lacertini (Squamata: Lacertidae: Lacertinae), with descriptions of eight new genera. Zootaxa 1430: 1-86.
Baig, K.J., Masroor, R. (2006): A new species of Eremias (Sauria: Lacertidae) from Cholistan Desert, Pakistan. Russ. J. Herpetol. 13: 167-174.
Boroumand, H., Saberi-Pirooz, R., Bafti, S.S., Böhme, W., Ahmadzadeh, F. (2024): Speciation in the Iranian plateau: Molecular phylogeny and evolutionary history of the Persian long-tailed desert lizard. Zool. Scr. 53: 312-322.
Eskandarzadeh, N., Rastegar-Pouyani, N., Rastegar-Pouyani, E., Zargan, J., Hajinourmohamadi, A., Nazarov, R.A., Sami, S., Rajabizadeh, M., Nabizadeh, H., Navaian, M. (2020): A new species of Eryx (Serpentes: Erycidae) from Iran. Zootaxa 4767: 182-192.
Flot, J.F. (2010): SeqPhase: A web tool for interconverting phase input/output files and fasta sequence alignments. Mol. Ecol. Res. 10: 162166.
Fonseca, M.M., Brito, J.C., Rebelo, H., Kalboussi, M., Larbes, S., Carretero, M.A., Harris, D.J. (2008): Genetic variation among spiny-footed lizards in the Acanthodactylus pardalis group from North Africa. Afr. Zool. 43: 8-15.
Gowande, G., Pal, S., Jablonski, D., Masroor, R., Phansalkar, P., D’Souza, P., Jayarajan, A., Shanker, K. (2021): Molecular phylogenetics and taxonomic reassessment of the widespread agamid lizard Calotes versicolor (Daudin, 1802) (Squamata, Agamidae) across South Asia. Vertebr. Zool. 71: 669-696.
Günther, A.C.L.G. (1864): The Reptiles of British India. Ray Society, London.
Guo, X., Dai, X., Dali, C., Papenfuss, T.J., Ananjeva, N.B., Melnikov, D.A., Wang, Y. (2011): Phylogeny and divergence times of some racerunner lizards (Lacertidae: Eremias) inferred from mitochondrial 16S rRNA gene segments. Mol. Phylogenet. Evol. 61: 400-412.
Guo, X.G., Chen, D.L., Wan, W.H., Wang, Y.Z. (2010): Review of systematics of the racerunner lizard (Lacertidae: Eremias). Sichuan J. Zool. 29: 665-672.
Hall, T.A. (1999): BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symp. Ser. 41: 95-98.
Harris, D.J., Arnold, E.N. (2000): Elucidation of the relationships of spiny footed lizards, Acanthodactylus spp. (Reptilia: Lacertidae) using mitochondrial DNA sequence, with comments on their biogeography and evolution. J. Zool. 252: 351-362.
Harris, D.J., Batista, V., Carretero, M. (2004): Assessment of genetic diversity within Acanthodactylus erythrurus (Reptilia: Lacertidae) in Morocco and the Iberian Peninsula using mitochondrial DNA sequence data. Amphib.-Reptil. 25: 227-232.
Heidari, N. (2019): Ecological niche differentiation between Acanthodactylus micropholis and A. khamirensis (Sauria: Lacertidae) in southern Iran. Zoologia 36: e27357.
Heidari, N., Rastegar-Pouyani, E., Rastegar-Pouyani, N., Faizi, H. (2014): Molecular phylogeny and biogeography of the genus Acanthodactylus Fitzinger, 1834 (Reptilia: Lacertidae) in Iran, inferred from mtDNA sequences. Zootaxa 3860: 379-395.
Heidari, N., Rastegar Pouyani, N., Rastegar-Pouyani, E., Rajabizadeh, M. (2013): A new species of Acanthodactylus Fitzinger 1834 (Sauria: Lacertidae) from southern Iran. Zootaxa 3722: 333-346.
Hipsley, C., Müller, J. (2017): Developmental dynamics of ecomorphological convergence in a transcontinental lizard radiation. Evolution 71: 936-948.
Jablonski, D., Basit, A., Farooqi, J., Masroor, R., Böhme, W. (2021): Biodiversity research in a changing Afghanistan. Science 6549: 1402.
Jablonski, D., Masroor, R. (2021): First record of Eremias kakari Masroor et al., 2020 (Squamata: Lacertidae) for Afghanistan. Bonn zool. Bull. 70: 63-65.
Jablonski, D., Mebert, K., Masroor, R., Simonov, E., Kukushkin, O., Abduraupov, T., Hofmann, S. (2024): The Silk roads: Phylogeography of Central Asian dice snakes (Serpentes: Natricidae) shaped by rivers in desert and mountain valleys. Curr. Zool. 70: 150-162.
Khan, M.A., Jablonski, D., Nadeem, M.S., Masroor, R., Kehlmaier, C., Spitzweg, C., Fritz, U. (2021): Molecular phylogeny of Eremias spp. from Pakistan contributes to a better understanding of the diversity of racerunners. J. Zool. Syst. Evol. Res. 59: 466-483.
Khan, M.S. (2006): Amphibians and Reptiles of Pakistan. Krieger Publishing Company, Malabar, FL.
Kirchhof, S., Lyra, M.L., Rodríguez, A., Ineich, I., Müller, J., Rödel, M.-O., Trape, J.-F., Vences, M., Boissinot, S. (2021): Mitogenome analyses elucidate the evolutionary relationships of a probable Eocene wet tropics relic in the xerophilic lizard genus Acanthodactylus. Sci. Rep. 11: 4858.
Lanfear, R., Frandsen, P.B., Wright, A.M., Senfeld, T., Calcott, B. (2017): PartitionFinder 2: New methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Mol. Biol. Evol. 34: 772-773.
Lawrence-Archer, J.H. (1878): Commentaries on the Punjab Campaign, 1848-49: Including Some Additions to the History of the Second Sikh War, from Original Sources. Wm. H. Allen & Co, London.
Leigh, J.W., Bryant, D. (2015): Popart: Full-feature software for haplotype network construction. Methods Ecol. Evol. 6: 1110-1116.
Masroor, R., Khan, M.A., Nadeem, M.S., Amir, S.A., Khisroon, M., Jablonski, D. (2022): Appearances often deceive in racerunners: Integrative approach reveals two new species of Eremias (Squamata: Lacertidae) from Pakistan. Zootaxa 5175: 55-87.
Masroor, R., Khisroon, M., Khan, M.A., Jablonski, D. (2020): A new species of Eremias (Squamata: Lacertidae) from the arid mountains of Pakistan. Zootaxa 4786: 101-121.
Mayer, W., Pavlicev, M. (2007): The phylogeny of the family Lacertidae (Reptilia) based on nuclear DNA sequences: Convergent adaptations to arid habitats within the subfamily Eremiainae. Mol. Phylogenet. Evol. 44: 1155-1163.
Minton, S.A. (1966): A contribution to the herpetology of West Pakistan. Bull. Am. Mus. Nat. His. 134: 27-184.
Miralles, A., Geniez, P., Beddek, M., Aranda, D.M., Brito, J.C., Leblois, R., Crochet, P.-A. (2020): Morphology and multilocus phylogeny of the spiny-footed lizard (Acanthodactylus erythrurus) complex reveal two new mountain species from the Moroccan Atlas. Zootaxa 4747: 302-326.
Moravec, J., Baha El Din, S., Seligmann, H., Sivan, N., Werner, Y.L. (1999): Systematics and distribution of the Acanthodactylus pardalis group (Lacertidae) in Egypt and Israel. Zool. Middle East 17: 21-50.
Mozaffari, O., Mohammadi, S., Saberi-Pirooz, R., Ahmadzadeh, R. (2021): A new species of Acanthodactylus Fitzinger, 1834 (Sauria: Lacertidae) from the Zagros Mountains, Iran. Zootaxa 5047: 17-32.
Noori, S., Hawlitschek, O., Oldeland, J., Rajaei, H., Husemann, M., Simões, M. (2021): Biodiversity modelling reveals a significant gap between diversity hotspots and protected areas for Iranian reptiles. J. Zool. Syst. Evol. Res. 59: 1642-1655.
Nouira, S., Blanc, C. (1999): Description d’une nouvelle espèce d’acanthodactyle de Tunisie: Acanthodactylus mechriguensis n. sp. (Sauria, Reptilia). Siciliana 5: 101-108.
Orlova, V.F., Rastegar-Pouyani, E., Rajabizadeh, K., Nabizadeh, H., Poyarkov, N.A., Melnikov, D.A., Nazarov, R.A. (2023): Taxonomic diversity of racerunners with descriptions of two new Eremias species (Sauria: Lacertidae) from Central Iran. Zootaxa 5369: 336-368.
Patel, H., Vyas, R. (2019): Reptiles of Gujarat, India: Updated checklist, distribution, and conservation status. Herpetol. Notes 12: 765-777.
Pola, L., Crochet, P.-A., Geniez, P., Shobrak, M., Busais, S., Jablonski, D., Masroor, R., Abduraupov, T., Carranza, S., Šmíd, J. (2024): Some like it hot: Past and present phylogeography of a desert dwelling gecko across the Arabian Peninsula. J. Biogeogr. 51: 1244-1258.
Rambaut, A., Drummond, A.J., Xie, D., Baele, G., Suchard, M.A. (2018): Posterior summarization in Bayesian phylogenetics using Tracer 1.7. Syst. Biol. 67: 901-904.
Rastegar-Pouyani, E., Rastegar-Pouyani, N., Kazemi-Noureini, S., Joger, U., Wink, M. (2010): Molecular phylogeny of the Eremias persica complex of the Iranian plateau (Reptilia: Lacertidae), based on mtDNA sequences. Zool. J. Linn. Soc. 158: 641-660.
Rastegar-Pouyani, N., Heydari, N., Faizi, H. (2011): Analysis of geographic variation in four populations of Acanthodactylus blanfordi Boulenger, 1918 (Sauria: Lacertidae) from southern and southeastern Iran. Russ. J. Herpetol. 18: 84-93.
Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M.A., Huelsenbeck, J.P. (2012): MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 61: 539-542.
Rozas, J., Ferrer-Mata, A., Sánchez-DelBarrio, J.C., Guirao-Rico, S., Librado, P., Ramos-Onsins, S.E., Sánchez-Gracia, A. (2017): DnaSP 6: DNA sequence polymorphism analysis of large data sets. Mol. Biol. Evol. 34: 3299-3302.
Salvador, A. (1982): A revision of the lizards of the genus Acanthodactylus (Sauria: Lacertidae). Bonn. zool. Monogr. 16: 1-167.
Sindaco, R., Jeremčenko, V.K. (2008): The reptiles of the Western Palearctic. 1. Belvedere, Latina.
Šmíd, J., Moravec, J., Kodym, P., Kratochvíl, L., Hosseinian-Yousefkhani, S.S., Rastegar-Pouyani, E., Frynta, D. (2014): Annotated checklist and distribution of the lizards of Iran. Zootaxa 3855: 1-97.
Solovyeva, E.N., Lebedev, V.S., Dunayev, E.A., Nazarov, R.A., Bannikova, A.A., Che, J., Murphy, R.W., Poyarkov, N.A. (2018): Cenozoic aridization in Central Eurasia shaped diversification of toad-headed agamas (Phrynocephalus; Agamidae, Reptilia). PeerJ 6: e4543.
Stamatakis, A. (2014): RAxML version 8: A tool for phylogenetic analysis and post-analysis of large phylogenies. Bioinformatics 30: 1312-1313.
Stephens, M., Smith, N.J., Donnelly, P. (2001): A new statistical method for haplotype reconstruction from population data. Am. J. Hum. Genet. 68: 978-989.
Tamar, K., Carranza, S., Sindaco, R., Moravec, J., Meiri, S. (2014): Systematics and phylogeography of Acanthodactylus schreiberi and its relationships with Acanthodactylus boskianus (Reptilia: Squamata: Lacertidae). Zool. J. Linn. Soc. 172: 720-739.
Tamar, K., Carranza, S., Sindaco, R., Moravec, J., Trape, J.F., Meiri, S. (2016): Out of Africa: Phylogeny and biogeography of the widespread genus Acanthodactylus (Reptilia: Lacertidae). Mol. Phylogenet. Evol. 103: 6-18.
Tamar, K., Els, J., Kornilios, P., Soorae, P., Tarroso, P., Thanou, E., Pereira, J., Shah, J.N., Elhassan, E.E.M., Aguhob, J.C., Badaam, S.F., Eltayeb, M.M., Pusey, R., Papenfuss, T.J., Macey, J.R., Carranza, S. (2021): The demise of a wonder: Evolutionary history and conservation assessments of the wonder gecko Teratoscincus keyserlingii (Gekkota, Sphaerodactylidae) in Arabia. PLoS ONE 16: e0244150.
Tamar, K., Geniez, P., Brito, J.P., Crochet, P.A. (2017): Systematic revision of Acanthodactylus busacki (Squamata: Lacertidae) with a description of a new species from Morocco. Zootaxa 4276: 357-386.
Uetz, P., Freed, P., Aguilar, R., Reyes, F., Kudera, J., Hošek, J. (2025): The Reptile Database. Available from: http://www.reptile-database.org [accessed 5 February 2025].
Wagner, P., Bauer, A.M., Leviton, A.E., Wilms, T.M., Böhme, W. (2016): A checklist of the amphibians and reptiles of Afghanistan – Exploring herpetodiversity using biodiversity archives. Proc. Calif. Acad. Sci. 63: 457-565.
Wu, N., Wang, S., Dujsebayeva, T.N., Chen, D., Ali, A., Guo, X. (2023): Geography and past climate changes have shaped the evolution of a widespread lizard in arid Central Asia. Mol. Phylogenet. Evol. 184: 107781.
All Time | Past 365 days | Past 30 Days | |
---|---|---|---|
Abstract Views | 361 | 362 | 52 |
Full Text Views | 16 | 16 | 1 |
PDF Views & Downloads | 34 | 34 | 5 |
This study examines the phylogeny and genetic diversity of the genus Acanthodactylus in the easternmost part of its distribution range, particularly in Pakistan. Using a concatenated dataset of mitochondrial (16S, COI, cyt b) and nuclear (Rag1) genes, we reconstructed the phylogenetic relationships using two tree-building methods that consistently revealed four strongly supported major clades (A-D). These clades exhibit significant genetic differentiation, with pronounced uncorrected p distances among them. Clade A, consisting of a single sequence identified as A. micropholis, is sister to the remaining clades. Clades B and C, both identified as A. blanfordii from the Helmand Basin in northwestern Balochistan, are geographically separated by the Chagai Hills and show moderate genetic differentiation. Clade D, identified as A. cantoris, is the most divergent and widespread clade, yet it shows shallow intraspecific genetic variation. An additional analysis of 177 cyt b sequences, including previously published data, supported our four main clades from the concatenated dataset. Clades B and C are novel and have not been identified before. Our research enhances the understanding of the evolutionary relationships and geographic distribution of Acanthodactylus in the eastern part of their wide distribution range and provides a well-supported phylogenetic framework for further taxonomic studies and conservation measures. Furthermore, we identify the type locality (“Ramnuggar”) of A. cantoris with Rasool Nagar (formerly called Ramnagar; 32.33°N, 73.78°E), Wazirabad District, Punjab Province, Pakistan.
All Time | Past 365 days | Past 30 Days | |
---|---|---|---|
Abstract Views | 361 | 362 | 52 |
Full Text Views | 16 | 16 | 1 |
PDF Views & Downloads | 34 | 34 | 5 |