Complete mitogenomic and phylogenetic characteristics of three parthenogenetic Artemia populations (Branchiopoda, Anostraca)
In: CrustaceanaAsian Regional Artemia Reference Center, Key Laboratory of Marine Resource Chemistry and Food Technology (TUST), Ministry of Education, Tianjin University of Science and Technology, 29 13th Avenue, Tianjin 300457, P.R. China
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Abstract
In this study, the complete mitochondrial genomes of three parthenogenetic Artemia populations were sequenced and analysed. The results indicate that these three genomes are similar in length (15 633-15 639 bp). Furthermore, the organization and order of all three genomes are identical, including 13 protein-coding genes (PCGs), 22 tRNA genes and 2 rRNA genes, as well as a major non-coding region (CR), with high AT bias. Furthermore, both the genetic distance and the phylogenetic analysis showed that the genus Artemia constitutes a monophyletic group, and the parthenogenetic Artemia populations here studied show the closest relationship with Artemia urmiana. This study provides baseline information on Artemia mitogenomes for further research on the taxonomy and evolutionary genetics of the genus, and thereby contributes to the conservation of Artemia germplasm resources.
Résumé
Dans cette étude, les génomes mitochondriaux complets de trois populations parthénogénétiques d’ Artemia ont été séquencés et analysés. Les résultats indiquent que ces trois génomes sont similaires en longueur (15 633 bp-15 639 bp). Par ailleurs, l’organisation et l’ordre de ces trois génomes sont identiques, incluant 13 gènes codant pour des protéines (PCGs), 22 gènes tRNA et 2 gènes rRNA, ainsi qu’une importante région non-codante (CR), avec un biais AT élevé. De plus, la distance génétique et l’analyse phylogénétique montrent toutes les deux que le genre Artemia constitue un groupe monophylétique, et que les populations parthénogénétiques d’ Artemia étudiées ici présentent le lien de parenté le plus étroit avec Artemia urmiana. Cette étude fournit l’information de base sur les mitogénomes d’Artemia pour les recherches futures sur la taxonomie et la génétique évolutive du genre, et contribue ainsi à la conservation des ressources en germoplasme d’Artemia.
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Complete mitogenomic and phylogenetic characteristics of three parthenogenetic Artemia populations (Branchiopoda, Anostraca)
In: CrustaceanaAsian Regional Artemia Reference Center, Key Laboratory of Marine Resource Chemistry and Food Technology (TUST), Ministry of Education, Tianjin University of Science and Technology, 29 13th Avenue, Tianjin 300457, P.R. China
Search for other papers by Xuekai Han in
Current site
Google Scholar
PubMed
Search for other papers by Rui Zhang in
Current site
Google Scholar
PubMed
Search for other papers by Xue Liu in
Current site
Google Scholar
PubMed
Search for other papers by Ke Li in
Current site
Google Scholar
PubMed
Search for other papers by Meirong Gao in
Current site
Google Scholar
PubMed
Search for other papers by Chi Zhang in
Current site
Google Scholar
PubMed
Search for other papers by Liying Sui in
Current site
Google Scholar
PubMed
Abstract
In this study, the complete mitochondrial genomes of three parthenogenetic Artemia populations were sequenced and analysed. The results indicate that these three genomes are similar in length (15 633-15 639 bp). Furthermore, the organization and order of all three genomes are identical, including 13 protein-coding genes (PCGs), 22 tRNA genes and 2 rRNA genes, as well as a major non-coding region (CR), with high AT bias. Furthermore, both the genetic distance and the phylogenetic analysis showed that the genus Artemia constitutes a monophyletic group, and the parthenogenetic Artemia populations here studied show the closest relationship with Artemia urmiana. This study provides baseline information on Artemia mitogenomes for further research on the taxonomy and evolutionary genetics of the genus, and thereby contributes to the conservation of Artemia germplasm resources.
Résumé
Dans cette étude, les génomes mitochondriaux complets de trois populations parthénogénétiques d’ Artemia ont été séquencés et analysés. Les résultats indiquent que ces trois génomes sont similaires en longueur (15 633 bp-15 639 bp). Par ailleurs, l’organisation et l’ordre de ces trois génomes sont identiques, incluant 13 gènes codant pour des protéines (PCGs), 22 gènes tRNA et 2 gènes rRNA, ainsi qu’une importante région non-codante (CR), avec un biais AT élevé. De plus, la distance génétique et l’analyse phylogénétique montrent toutes les deux que le genre Artemia constitue un groupe monophylétique, et que les populations parthénogénétiques d’ Artemia étudiées ici présentent le lien de parenté le plus étroit avec Artemia urmiana. Cette étude fournit l’information de base sur les mitogénomes d’Artemia pour les recherches futures sur la taxonomie et la génétique évolutive du genre, et contribue ainsi à la conservation des ressources en germoplasme d’Artemia.
| All Time | Past 365 days | Past 30 Days | |
|---|---|---|---|
| Abstract Views | 200 | 200 | 27 |
| Full Text Views | 2 | 2 | 0 |
| PDF Views & Downloads | 6 | 6 | 0 |
